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  5. Spa_g12146

Spa_g12146 (SUB1)


Aliases : SUB1

Description : not classified & original description: none


Gene families : OG0002790 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002790_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00183870 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT4G08810 SUB1 calcium ion binding 0.02 OrthoFinder output from all 47 species
Aev_g17429 SUB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27684 SUB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025447001 SUB1 No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01030123001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_07372 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g43990.1 SUB1, LOC_Os07g43990 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g31810.1 LOC_Os10g31810 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_19916g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g12337 SUB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12504 SUB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo84756 SUB1 No description available 0.04 OrthoFinder output from all 47 species
Solyc07g045210.1.1 Solyc07g045210 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Tin_g07028 SUB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004666_P001 Zm00001e004666 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e035640_P002 SUB1, Zm00001e035640 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 280 511
No external refs found!