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  5. Spa_g12091

Spa_g12091 (SYP43, ATSYP43)


Aliases : SYP43, ATSYP43

Description : Qa-type SYP4-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0004092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12091

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001206.20 SYP43, ATSYP43 Vesicle trafficking.SNARE target membrane recognition... 0.01 OrthoFinder output from all 47 species
Gb_31707 ATSYP41, ATTLG2A, SYP41 SYP4-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 265 317
No external refs found!