Spa_g12089 (GAD4)

Aliases : GAD4

Description : glutamate decarboxylase *(GAD) & original description: none

Gene families : OG0000690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000690_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g12089

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00144920	GAD5,...	Glutamate decarboxylase 5 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00024p00145270	GAD, GAD1,...	Amino acid metabolism.biosynthesis.glutamate...	0.03	OrthoFinder output from all 47 species
AT5G17330	GAD, GAD1	glutamate decarboxylase	0.04	OrthoFinder output from all 47 species
Aev_g01082	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g38116	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene37978.t1	GAD, GAD1,...	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene69536.t1	GAD, GAD1,...	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g48925	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g01418	GAD4	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g10197	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g10779	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g15377	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os03g13300.1	GAD, GAD1, LOC_Os03g13300	glutamate decarboxylase	0.02	OrthoFinder output from all 47 species
LOC_Os08g36320.1	GAD, GAD1, LOC_Os08g36320	glutamate decarboxylase	0.04	OrthoFinder output from all 47 species
Len_g20416	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g22346	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
MA_13282g0020	GAD, GAD1	glutamate decarboxylase	0.02	OrthoFinder output from all 47 species
Nbi_g09361	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g06503	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g41329	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g45178	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g61216	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g17072	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007078	GAD2	glutamate decarboxylase *(GAD) & original description:...	0.03	OrthoFinder output from all 47 species
Smo164618	GAD, GAD1	Amino acid metabolism.biosynthesis.glutamate...	0.03	OrthoFinder output from all 47 species
Solyc04g025530.3.1	GAD4, Solyc04g025530	glutamate decarboxylase	0.03	OrthoFinder output from all 47 species
Solyc05g054050.4.1	GAD, GAD1, Solyc05g054050	glutamate decarboxylase	0.03	OrthoFinder output from all 47 species
Spa_g05104	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	IEA	Interproscan
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002129	PyrdxlP-dep_de-COase	31	378

External Links

No external refs found!

Spa_g12089 (GAD4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation