Spa_g12049 (ATCLC-C, CLC-C)

Aliases : ATCLC-C, CLC-C

Description : anion channel / anion:proton antiporter *(CLC) & original description: none

Gene families : OG0000501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000501_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g12049

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00233520	CLC-A, ATCLC-A,...	Chloride channel protein CLC-a OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Adi_g080814	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene39433.t1	Aspi01Gene39433	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene51484.t1	ATCLC-C, CLC-C,...	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Cba_g27347	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Dcu_g12890	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Nbi_g37480	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.04	OrthoFinder output from all 47 species
Ore_g12404	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Ore_g32978	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Pnu_g01742	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016309	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.05	OrthoFinder output from all 47 species
Sam_g51279	No alias	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Solyc01g103140.3.1	ATCLC-C, CLC-C,...	anion channel / anion:proton antiporter (CLC)	0.03	OrthoFinder output from all 47 species
Tin_g25650	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005244	voltage-gated monoatomic ion channel activity	None	Extended
MF	GO:0005247	voltage-gated chloride channel activity	IEA	Interproscan
MF	GO:0005253	monoatomic anion channel activity	None	Extended
MF	GO:0005254	chloride channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006820	monoatomic anion transport	None	Extended
BP	GO:0006821	chloride transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008308	voltage-gated monoatomic anion channel activity	None	Extended
MF	GO:0008509	monoatomic anion transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015108	chloride transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001807	Cl-channel_volt-gated	97	512
IPR000644	CBS_dom	548	604

External Links

No external refs found!

Spa_g12049 (ATCLC-C, CLC-C)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation