Spa_g12038


Description : not classified & original description: none


Gene families : OG0001375 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001375_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12038

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00165p00040130 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Adi_g021126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108961 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23770 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g51804 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g18361 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.06G029400.1 Ceric.06G029400 not classified & original description: pacid=50619375... 0.05 OrthoFinder output from all 47 species
Ceric.25G064700.1 Ceric.25G064700 not classified & original description: pacid=50594694... 0.01 OrthoFinder output from all 47 species
Dac_g31135 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g37019 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g29671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016431001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01024844001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01034054001 No alias No description available 0.03 OrthoFinder output from all 47 species
MA_10150984g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_28425g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g11680 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g31328 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g17463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19134 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e026929_P001 Zm00001e026929 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!