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  5. Spa_g11879

Spa_g11879


Description : clade E phosphatase & original description: none


Gene families : OG0000149 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g11879
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00202740 evm_27.TU.AmTr_v1... Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
AT1G03590 No alias Protein phosphatase 2C family protein 0.03 OrthoFinder output from all 47 species
Ala_g08463 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25792 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46767 No alias clade E phosphatase & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g12613 No alias clade E phosphatase & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g21712 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15427.t1 Aspi01Gene15427 clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27362.t1 Aspi01Gene27362 clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75874 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G055400.1 Ceric.11G055400 clade E phosphatase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.19G064800.1 Ceric.19G064800 clade E phosphatase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g11738 No alias clade E phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g13223 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24875 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02389 No alias clade E phosphatase & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01030261001 No alias Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder output from all 47 species
LOC_Os07g37890.1 LOC_Os07g37890 clade E phosphatase 0.02 OrthoFinder output from all 47 species
Len_g13045 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22736 No alias clade E phosphatase & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g29150 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12129 No alias clade E phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15331 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19594 No alias clade E phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Solyc08g065500.2.1 Solyc08g065500 clade E phosphatase 0.04 OrthoFinder output from all 47 species
Solyc08g065670.4.1 Solyc08g065670 clade E phosphatase 0.04 OrthoFinder output from all 47 species
Solyc08g065680.3.1 Solyc08g065680 Probable protein phosphatase 2C 38 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Solyc10g005640.4.1 Solyc10g005640 clade E phosphatase 0.03 OrthoFinder output from all 47 species
Spa_g22595 No alias clade E phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53890 No alias clade E phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e009275_P001 Zm00001e009275 clade E phosphatase 0.03 OrthoFinder output from all 47 species
Zm00001e024719_P002 Zm00001e024719 clade E phosphatase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 96 342
No external refs found!