Spa_g11563

Description : EC_4.1 carbon-carbon lyase & original description: none

Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g11563
Cluster	HCCA: Cluster_187

Target	Alias	Description	ECC score	Gene Family Method
Adi_g004507	SAMDC	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.34G041400.1	SAMDC, Ceric.34G041400	EC_4.1 carbon-carbon lyase & original description:...	0.02	OrthoFinder output from all 47 species
Dac_g11559	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g02761	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01008730001	No alias	Ornithine decarboxylase OS=Capsicum annuum	0.03	OrthoFinder output from all 47 species
GSVIVT01017856001	SAMDC4, BUD2	Polyamine...	0.02	OrthoFinder output from all 47 species
Len_g20881	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g13674	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e011219_P001	Zm00001e011219	ornithine decarboxylase	0.03	OrthoFinder output from all 47 species
Zm00001e041156_P001	Zm00001e041156	S-adenosyl methionine decarboxylase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEA	Interproscan
BP	GO:0006576	biogenic amine metabolic process	None	Extended
BP	GO:0006595	polyamine metabolic process	None	Extended
BP	GO:0006596	polyamine biosynthetic process	None	Extended
BP	GO:0006597	spermine biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008215	spermine metabolic process	None	Extended
BP	GO:0008216	spermidine metabolic process	None	Extended
BP	GO:0008295	spermidine biosynthetic process	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009309	amine biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042401	biogenic amine biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001985	S-AdoMet_decarboxylase	14	382

External Links

No external refs found!

Spa_g11563

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation