1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g11485

Spa_g11485 (CLUB, AtTRS130)


Aliases : CLUB, AtTRS130

Description : component *(TRS130/CLUB) of TRAPP-II complex-specific components & original description: none


Gene families : OG0004255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004255_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g11485

Target Alias Description ECC score Gene Family Method Actions
AT5G54440 CLUB, AtTRS130 CLUB 0.04 OrthoFinder output from all 47 species
Ala_g02703 CLUB, AtTRS130 component *(TRS130/CLUB) of TRAPP-II complex-specific... 0.03 OrthoFinder output from all 47 species
Als_g03262 CLUB, AtTRS130 component *(TRS130/CLUB) of TRAPP-II complex-specific... 0.04 OrthoFinder output from all 47 species
Cba_g20257 CLUB, AtTRS130 component *(TRS130/CLUB) of TRAPP-II complex-specific... 0.06 OrthoFinder output from all 47 species
Ceric.31G071500.1 CLUB, AtTRS130,... component *(TRS130/CLUB) of TRAPP-II complex-specific... 0.03 OrthoFinder output from all 47 species
Dcu_g49050 CLUB, AtTRS130 component *(TRS130/CLUB) of TRAPP-II complex-specific... 0.02 OrthoFinder output from all 47 species
Gb_23994 CLUB, AtTRS130 component TRS130/CLUB of TRAPP-II complex-specific components 0.04 OrthoFinder output from all 47 species
LOC_Os12g36760.1 CLUB, AtTRS130,... component TRS130/CLUB of TRAPP-II complex-specific components 0.11 OrthoFinder output from all 47 species
Len_g12312 CLUB, AtTRS130 component *(TRS130/CLUB) of TRAPP-II complex-specific... 0.04 OrthoFinder output from all 47 species
Mp2g04830.1 CLUB, AtTRS130 component TRS130/CLUB of TRAPP-II complex-specific components 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004685 CLUB, AtTRS130 component *(TRS130/CLUB) of TRAPP-II complex-specific... 0.03 OrthoFinder output from all 47 species
Solyc07g063440.3.1 CLUB, AtTRS130,... component TRS130/CLUB of TRAPP-II complex-specific components 0.04 OrthoFinder output from all 47 species
Tin_g01296 CLUB, AtTRS130 component *(TRS130/CLUB) of TRAPP-II complex-specific... 0.06 OrthoFinder output from all 47 species
Zm00001e018229_P001 CLUB, AtTRS130,... component TRS130/CLUB of TRAPP-II complex-specific components 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR021773 TPC11 582 668
IPR022233 TRAPP_II_complex_TRAPPC10_C 1213 1292
No external refs found!