1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g10803

Spa_g10803


Description : component *(RBL/SWD1) of COMPASS histone trimethylation complex & original description: none


Gene families : OG0004928 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004928_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10803
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT3G21060 No alias Transducin/WD40 repeat-like superfamily protein 0.04 OrthoFinder output from all 47 species
Ceric.02G050900.1 Ceric.02G050900 component *(RBL/SWD1) of COMPASS histone trimethylation... 0.03 OrthoFinder output from all 47 species
Lfl_g03233 No alias component *(RBL/SWD1) of COMPASS histone trimethylation... 0.02 OrthoFinder output from all 47 species
Solyc01g096950.4.1 Solyc01g096950 component RBL of COMPASS histone trimethylation complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 68 96
IPR001680 WD40_repeat 22 51
No external refs found!