1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g10770

Spa_g10770


Description : not classified & original description: none


Gene families : OG0001992 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001992_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10770
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Adi_g076988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g109854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19404.t1 Aspi01Gene19404 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07047 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_30397 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_40983 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g09762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g066990.2.1 Solyc11g066990 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g01224 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0031047 RNA-mediated gene silencing IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005380 XS_domain 826 953
No external refs found!