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  5. Spa_g10764

Spa_g10764


Description : splicing factor *(CFM9) & original description: none


Gene families : OG0001914 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001914_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10764
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00218010 evm_27.TU.AmTr_v1... Uncharacterized CRM domain-containing protein At3g25440,... 0.04 OrthoFinder output from all 47 species
AT3G27550 No alias RNA-binding CRS1 / YhbY (CRM) domain protein 0.03 OrthoFinder output from all 47 species
Als_g11882 No alias splicing factor *(CFM9) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0015.g014017 No alias splicing factor *(CFM9) & original description: CDS=265-1956 0.02 OrthoFinder output from all 47 species
Azfi_s0094.g043502 No alias splicing factor *(CFM9) & original description: CDS=58-1365 0.02 OrthoFinder output from all 47 species
Dde_g18626 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032387001 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.04 OrthoFinder output from all 47 species
Gb_39033 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species
LOC_Os06g20030.1 LOC_Os06g20030 Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species
Mp2g03710.1 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.02 OrthoFinder output from all 47 species
Nbi_g10778 No alias splicing factor *(CFM9) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29576 No alias splicing factor *(CFM9) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08828 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 157 241
No external refs found!