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  4. Sequence
  5. Spa_g10732

Spa_g10732


Description : not classified & original description: none


Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10732

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00055770 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g075360 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g13882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G072100.1 Ceric.05G072100 not classified & original description: pacid=50579173... 0.04 OrthoFinder output from all 47 species
Ceric.21G009500.1 Ceric.21G009500 not classified & original description: pacid=50602780... 0.04 OrthoFinder output from all 47 species
Ceric.25G053000.1 Ceric.25G053000 not classified & original description: pacid=50593159... 0.05 OrthoFinder output from all 47 species
Ceric.28G000600.1 Ceric.28G000600 not classified & original description: pacid=50570870... 0.04 OrthoFinder output from all 47 species
GSVIVT01004457001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os07g03140.1 LOC_Os07g03140 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g40420.1 LOC_Os08g40420 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g28850.1 LOC_Os09g28850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_1960g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_19648g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g27890.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g36591 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g19357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g109270.3.1 Solyc01g109270 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g089980.3.1 Solyc02g089980 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g082970.4.1 Solyc04g082970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g008560.2.1 Solyc06g008560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g13862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002322_P002 Zm00001e002322 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e011613_P001 Zm00001e011613 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR006869 DUF547 459 591
IPR025757 MIP1_Leuzipper 114 194
No external refs found!