Aliases : TTN8, ATSMC1, SMC1
Description : component *(SMC1/TTN8) of cohesin regulator complex & original description: none
Gene families : OG0004293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004293_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00047p00208850 | TTN8, ATSMC1,... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.02 | OrthoFinder output from all 47 species | |
AT3G54670 | TTN8, ATSMC1, SMC1 | Structural maintenance of chromosomes (SMC) family protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g010815 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.05 | OrthoFinder output from all 47 species | |
Aev_g04880 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g02668 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.07 | OrthoFinder output from all 47 species | |
Als_g01964 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.07 | OrthoFinder output from all 47 species | |
Ceric.32G063300.1 | TTN8, ATSMC1,... | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.07 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020553.145 | TTN8, ATSMC1, SMC1 | Cell cycle.mitosis and meiosis.sister chromatid... | 0.01 | OrthoFinder output from all 47 species | |
Ehy_g01679 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01028343001 | TTN8, ATSMC1, SMC1 | Cell cycle.mitosis and meiosis.sister chromatid... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os12g44390.1 | TTN8, ATSMC1,... | component SMC1/TTN8 of cohesin regulator complex | 0.04 | OrthoFinder output from all 47 species | |
Len_g15272 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.02 | OrthoFinder output from all 47 species | |
MA_10429667g0010 | TTN8, ATSMC1, SMC1 | Structural maintenance of chromosomes protein 1... | 0.03 | OrthoFinder output from all 47 species | |
Mp1g29090.1 | TTN8, ATSMC1, SMC1 | component SMC1/TTN8 of cohesin regulator complex | 0.02 | OrthoFinder output from all 47 species | |
Ore_g08908 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g13217 | TTN8, ATSMC1, SMC1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g11833 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g01407 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g38474 | No alias | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g083870.3.1 | TTN8, ATSMC1,... | component SMC1/TTN8 of cohesin regulator complex | 0.02 | OrthoFinder output from all 47 species | |
Tin_g02901 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e003843_P001 | TTN8, ATSMC1,... | component SMC1/TTN8 of cohesin regulator complex | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
CC | GO:0005694 | chromosome | IEA | Interproscan |
BP | GO:0051276 | chromosome organization | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006473 | protein acetylation | IEP | HCCA |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016573 | histone acetylation | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043543 | protein acylation | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
No external refs found! |