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  5. Spa_g10067

Spa_g10067


Description : not classified & original description: none


Gene families : OG0006959 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006959_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10067
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Ore_g09199 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02151 HS, HWS not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005915 HS, HWS not classified & original description: CDS=1-1197 0.03 OrthoFinder output from all 47 species
Spa_g09474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19883 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!