Spa_g09961

Description : not classified & original description: none

Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g09961

Target	Alias	Description	ECC score	Gene Family Method
AT1G17640	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.02	OrthoFinder output from all 47 species
Adi_g054784	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g111133	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01027891001	No alias	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Ore_g19973	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g10981	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	8	68
IPR000504	RRM_dom	111	169

External Links

No external refs found!