Spa_g09351


Description : not classified & original description: none


Gene families : OG0000898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000898_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g09351

Target Alias Description ECC score Gene Family Method Actions
Adi_g059258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088251 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09930 FRL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21938 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g06900.1 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g01067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g008840.3.1 Solyc04g008840 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e033632_P002 Zm00001e033632 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR012474 Frigida 150 444
No external refs found!