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  5. Spa_g09324

Spa_g09324 (HIS1-3)


Aliases : HIS1-3

Description : linker histone *(H1) & original description: none


Gene families : OG0000310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g09324

Target Alias Description ECC score Gene Family Method Actions
AT2G30620 No alias winged-helix DNA-binding transcription factor family protein 0.05 OrthoFinder output from all 47 species
Adi_g052669 No alias linker histone *(H1) & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g104846 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35464 HIS1-3 linker histone *(H1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04558 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23326 HIS1-3 linker histone *(H1) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g08116 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30809 HIS1-3 linker histone *(H1) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05135 HIS1-3 linker histone *(H1) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g36461 HIS1-3 linker histone *(H1) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene11879.t1 HIS1-3, Aspi01Gene11879 linker histone *(H1) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11880.t1 HIS1-3, Aspi01Gene11880 linker histone *(H1) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25496.t1 HIS1-3, Aspi01Gene25496 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42128.t1 HIS1-3, Aspi01Gene42128 linker histone *(H1) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.30G028200.1 HIS1-3, Ceric.30G028200 linker histone *(H1) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.34G044200.1 Ceric.34G044200 linker histone *(H1) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020780.71 HIS1-3 No description available 0.02 OrthoFinder output from all 47 species
Cre13.g567450 HIS1-3 Chromatin organisation.histones.H1 linker histone 0.03 OrthoFinder output from all 47 species
Dac_g20797 HIS1-3 linker histone *(H1) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g00585 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02558 HIS1-3 linker histone *(H1) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01028074001 No alias Chromatin organisation.histones.H1 linker histone 0.03 OrthoFinder output from all 47 species
Gb_02738 No alias linker histone (H1) 0.03 OrthoFinder output from all 47 species
Gb_03348 HIS1-3 linker histone (H1) 0.03 OrthoFinder output from all 47 species
LOC_Os04g18090.1 HIS1-3, LOC_Os04g18090 linker histone (H1) 0.02 OrthoFinder output from all 47 species
LOC_Os07g08710.1 LOC_Os07g08710 linker histone (H1) 0.06 OrthoFinder output from all 47 species
Len_g23782 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54319 No alias linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
MA_102457g0010 No alias linker histone (H1) 0.04 OrthoFinder output from all 47 species
MA_10436125g0010 HIS1-3 linker histone (H1) 0.03 OrthoFinder output from all 47 species
MA_10436125g0020 ATTRB1, TRB1 linker histone (H1) 0.02 OrthoFinder output from all 47 species
MA_173054g0010 HIS1-3 linker histone (H1) 0.02 OrthoFinder output from all 47 species
MA_349682g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_500183g0010 HIS1-3 linker histone (H1) 0.03 OrthoFinder output from all 47 species
MA_877599g0010 No alias linker histone (H1) 0.04 OrthoFinder output from all 47 species
Msp_g09818 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04093 HIS1-3 linker histone *(H1) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c18_14270V3.1 Pp3c18_14270 winged-helix DNA-binding transcription factor family protein 0.03 OrthoFinder output from all 47 species
Ppi_g09013 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11041 No alias linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11042 No alias linker histone *(H1) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc09g066100.3.1 Solyc09g066100 linker histone (H1) 0.03 OrthoFinder output from all 47 species
Solyc09g083380.4.1 Solyc09g083380 linker histone (H1) 0.03 OrthoFinder output from all 47 species
Spa_g20559 No alias linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31027 HIS1-3 linker histone *(H1) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01715 HIS1-3 linker histone *(H1) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007189_P001 HIS1-3, Zm00001e007189 linker histone (H1) 0.03 OrthoFinder output from all 47 species
Zm00001e011857_P001 Zm00001e011857 linker histone (H1) 0.04 OrthoFinder output from all 47 species
Zm00001e011859_P001 Zm00001e011859 linker histone (H1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 38 104
No external refs found!