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  5. Spa_g09311

Spa_g09311 (EIF2, AteIF3f, eIF3F)


Aliases : EIF2, AteIF3f, eIF3F

Description : component *(eIF3f) of eIF3 mRNA-to-PIC binding complex & original description: none


Gene families : OG0004531 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004531_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g09311

Target Alias Description ECC score Gene Family Method Actions
AT2G39990 EIF2, AteIF3f, eIF3F eukaryotic translation initiation factor 2 0.04 OrthoFinder output from all 47 species
Aop_g13170 EIF2, AteIF3f, eIF3F component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0754.g085338 EIF2, AteIF3f, eIF3F component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Ceric.19G025600.1 EIF2, AteIF3f,... component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001355.7 EIF2, AteIF3f, eIF3F Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Cre16.g654500 EIF2, AteIF3f, eIF3F Protein biosynthesis.translation... 0.08 OrthoFinder output from all 47 species
Ehy_g25623 EIF2, AteIF3f, eIF3F component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Gb_36251 EIF2, AteIF3f, eIF3F component eIF3f of eIF3 mRNA-to-PIC binding complex 0.04 OrthoFinder output from all 47 species
LOC_Os05g01450.1 EIF2, AteIF3f,... component eIF3f of eIF3 mRNA-to-PIC binding complex 0.04 OrthoFinder output from all 47 species
Mp5g18020.1 EIF2, AteIF3f, eIF3F component eIF3f of eIF3 mRNA-to-PIC binding complex 0.08 OrthoFinder output from all 47 species
Nbi_g04161 EIF2, AteIF3f, eIF3F component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.06 OrthoFinder output from all 47 species
Solyc05g052690.4.1 EIF2, AteIF3f,... component eIF3f of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
Solyc11g013440.2.1 EIF2, AteIF3f,... component eIF3f of eIF3 mRNA-to-PIC binding complex 0.06 OrthoFinder output from all 47 species
Zm00001e029699_P001 EIF2, AteIF3f,... component eIF3f of eIF3 mRNA-to-PIC binding complex 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
MF GO:0008237 metallopeptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006412 translation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 18 122
IPR024969 Rpn11/EIF3F_C 171 277
No external refs found!