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  5. Spa_g09197

Spa_g09197


Description : AHL clade-B transcription factor & original description: none


Gene families : OG0000263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g09197

Target Alias Description ECC score Gene Family Method Actions
Dde_g25460 No alias AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Gb_40521 No alias AT-hook motif nuclear-localized protein 10... 0.04 OrthoFinder output from all 47 species
Pir_g04551 No alias AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e024390_P002 Zm00001e024390 AT-hook motif nuclear-localized protein 10... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 139 252
No external refs found!