Spa_g09143 (GCH, ATGCH, RFD1, ATRIBA1)

Aliases : GCH, ATGCH, RFD1, ATRIBA1

Description : EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & original description: none

Gene families : OG0001684 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001684_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g09143

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00210700	GCH, ATGCH,...	Coenzyme metabolism.FMN/FAD biosynthesis.bifunctional...	0.02	OrthoFinder output from all 47 species
AT5G64300	GCH, ATGCH, RFD1, ATRIBA1	GTP cyclohydrolase II	0.03	OrthoFinder output from all 47 species
Ala_g09242	GCH, ATGCH, RFD1, ATRIBA1	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.03	OrthoFinder output from all 47 species
Als_g39205	GCH, ATGCH, RFD1, ATRIBA1	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.04	OrthoFinder output from all 47 species
Als_g47537	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g01957	GCH, ATGCH, RFD1, ATRIBA1	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.03	OrthoFinder output from all 47 species
Aspi01Gene53186.t1	GCH, ATGCH,...	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.04	OrthoFinder output from all 47 species
Azfi_s0021.g015739	GCH, ATGCH, RFD1, ATRIBA1	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.03	OrthoFinder output from all 47 species
Ceric.24G065700.1	GCH, ATGCH,...	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.03	OrthoFinder output from all 47 species
Dac_g15942	GCH, ATGCH, RFD1, ATRIBA1	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.05	OrthoFinder output from all 47 species
GSVIVT01015676001	GCH, ATGCH, RFD1, ATRIBA1	Coenzyme metabolism.FMN/FAD biosynthesis.bifunctional...	0.04	OrthoFinder output from all 47 species
LOC_Os02g36340.1	GCH, ATGCH,...	bifunctional GTP cyclohydrolase II (RibA) and DHBP...	0.05	OrthoFinder output from all 47 species
Len_g28398	GCH, ATGCH, RFD1, ATRIBA1	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.03	OrthoFinder output from all 47 species
MA_10434618g0010	GCH, ATGCH, RFD1, ATRIBA1	bifunctional GTP cyclohydrolase II (RibA) and DHBP...	0.04	OrthoFinder output from all 47 species
Mp6g19580.1	GCH, ATGCH, RFD1, ATRIBA1	bifunctional GTP cyclohydrolase II (RibA) and DHBP...	0.02	OrthoFinder output from all 47 species
Solyc01g105560.3.1	GCH, ATGCH,...	bifunctional GTP cyclohydrolase II (RibA) and DHBP...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006766	vitamin metabolic process	None	Extended
BP	GO:0006767	water-soluble vitamin metabolic process	None	Extended
BP	GO:0006771	riboflavin metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009110	vitamin biosynthetic process	None	Extended
BP	GO:0009231	riboflavin biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042364	water-soluble vitamin biosynthetic process	None	Extended
BP	GO:0042726	flavin-containing compound metabolic process	None	Extended
BP	GO:0042727	flavin-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0007034	vacuolar transport	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032677	GTP_cyclohydro_II	321	485
IPR000422	DHBP_synthase_RibB	116	310

External Links

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Spa_g09143 (GCH, ATGCH, RFD1, ATRIBA1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation