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  5. Spa_g09114

Spa_g09114


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g09114

Target Alias Description ECC score Gene Family Method Actions
Adi_g055309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g063944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11380 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18752 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40125 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55312 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03222 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04899 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g58159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0154.g053516 No alias not classified & original description: CDS=1-1896 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.02 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s1399.g102576 No alias not classified & original description: CDS=1-1533 0.03 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g07768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10259 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g30014 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67874 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G030900.1 CRR22, Ceric.03G030900 not classified & original description: pacid=50573050... 0.03 OrthoFinder output from all 47 species
Ceric.05G023100.1 Ceric.05G023100 not classified & original description: pacid=50578135... 0.03 OrthoFinder output from all 47 species
Ceric.21G077300.1 Ceric.21G077300 not classified & original description: pacid=50604263... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g33405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51819 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19629 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59872 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05005 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15176 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17403 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g62227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63884 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11351 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13365 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18939 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43486 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44241 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 423 470
IPR002885 Pentatricopeptide_repeat 195 241
IPR002885 Pentatricopeptide_repeat 312 338
IPR002885 Pentatricopeptide_repeat 746 767
IPR002885 Pentatricopeptide_repeat 658 686
IPR002885 Pentatricopeptide_repeat 948 972
IPR002885 Pentatricopeptide_repeat 542 571
IPR002885 Pentatricopeptide_repeat 98 126
No external refs found!