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  5. Spa_g08979

Spa_g08979 (ATROPGEF1, ROPGEF1)


Aliases : ATROPGEF1, ROPGEF1

Description : RopGEF guanine nucleotide exchange factor *(PRONE) & original description: none


Gene families : OG0000396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08979

Target Alias Description ECC score Gene Family Method Actions
AT1G31650 ROPGEF14, ATROPGEF14 RHO guanyl-nucleotide exchange factor 14 0.03 OrthoFinder output from all 47 species
AT4G38430 ATROPGEF1, ROPGEF1 rho guanyl-nucleotide exchange factor 1 0.03 OrthoFinder output from all 47 species
Adi_g031515 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.02 OrthoFinder output from all 47 species
Adi_g054638 ATROPGEF5, ROPGEF5 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene02176.t1 ATROPGEF5,... RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene30585.t1 ROPGEF7,... RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0048.g030504 ROPGEF7, ATROPGEF7 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.07 OrthoFinder output from all 47 species
Azfi_s0084.g038941 ROPGEF7, ATROPGEF7 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.04 OrthoFinder output from all 47 species
Cba_g06514 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Pir_g35651 ROPGEF7, ATROPGEF7 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Solyc01g111930.4.1 ATROPGEF1,... PRONE-type RopGEF guanine nucleotide exchange factor 0.03 OrthoFinder output from all 47 species
Spa_g30663 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Spa_g51813 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.04 OrthoFinder output from all 47 species
Zm00001e010284_P002 ATROPGEF1,... PRONE-type RopGEF guanine nucleotide exchange factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR005512 PRONE_dom 125 494
No external refs found!