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  5. Spa_g08972

Spa_g08972 (ATXYL1, XYL1, TRG1)


Aliases : ATXYL1, XYL1, TRG1

Description : EC_3.2 glycosylase & original description: none


Gene families : OG0001972 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001972_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08972
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00038550 ATXYL1, XYL1,... Cell wall.hemicellulose.xyloglucan.modification and... 0.03 OrthoFinder output from all 47 species
AT1G68560 ATXYL1, XYL1, TRG1 alpha-xylosidase 1 0.04 OrthoFinder output from all 47 species
Als_g08905 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49732.t1 ATXYL1, XYL1,... EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g18090 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12611 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g30299 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g03950.1 ATXYL1, XYL1,... 1,6-alpha-xylosidase 0.03 OrthoFinder output from all 47 species
LOC_Os06g46284.2 LOC_Os06g46284 Probable alpha-glucosidase Os06g0675700 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Len_g56805 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g38030 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07595 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18091 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01195 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000322 Glyco_hydro_31 246 739
IPR031727 Gal_mutarotase_N 39 157
IPR025887 Glyco_hydro_31_N_dom 161 225
No external refs found!