1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g08942

Spa_g08942 (ATVAMP721, VAMP7B,...)


Aliases : ATVAMP721, VAMP7B, VAMP721, AT VAMP7B

Description : R-type VAMP7-group component of SNARE longin membrane fusion complex & original description: none


Gene families : OG0000720 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08942

Target Alias Description ECC score Gene Family Method Actions
Adi_g009467 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Adi_g088704 SAR1, ATVAMP722, VAMP722 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Als_g06684 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Als_g39830 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Aspi01Gene30426.t1 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Cba_g15943 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Cre04.g225900 ATVAMP725, VAMP725 Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
Dcu_g42897 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Ehy_g06509 VAMP726, ATVAMP726 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Ehy_g07426 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
LOC_Os03g58840.1 ATVAMP721,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 OrthoFinder output from all 47 species
LOC_Os08g44430.2 VAMP727,... VAMP7-type R-type SNARE longin protein 0.02 OrthoFinder output from all 47 species
Nbi_g05177 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Ore_g01479 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Pp3c4_13580V3.1 ATVAMP725,... vesicle-associated membrane protein 726 0.01 OrthoFinder output from all 47 species
Solyc02g069150.3.1 ATVAMP721,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species
Tin_g00364 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Zm00001e009585_P002 ATVAMP725,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR042855 V_SNARE_CC 129 215
IPR010908 Longin_dom 32 110
No external refs found!