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  5. Spa_g08876

Spa_g08876


Description : deubiquitinase & original description: none


Gene families : OG0000778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000778_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08876

Target Alias Description ECC score Gene Family Method Actions
AT1G80690 No alias PPPDE putative thiol peptidase family protein 0.03 OrthoFinder output from all 47 species
Azfi_s0139.g051213 No alias deubiquitinase & original description: CDS=368-799 0.03 OrthoFinder output from all 47 species
LOC_Os04g46290.1 LOC_Os04g46290 peptidase (PPPDE) 0.02 OrthoFinder output from all 47 species
Solyc01g109430.3.1 Solyc01g109430 peptidase (PPPDE) 0.02 OrthoFinder output from all 47 species
Solyc12g006880.2.1 Solyc12g006880 peptidase (PPPDE) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008233 peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 16 149
No external refs found!