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  5. Spa_g08208

Spa_g08208


Description : nucleotidyl transferase component *(TRL) of TRAMP RNA-exosome-regulation complex & original description: none


Gene families : OG0001897 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001897_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08208
Cluster HCCA: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
Solyc10g006990.3.1 Solyc10g006990 poly(A) RNA polymerase (TRF4) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004725 protein tyrosine phosphatase activity IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR002058 PAP_assoc 220 277
IPR002934 Polymerase_NTP_transf_dom 54 97
No external refs found!