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  5. Spa_g07930

Spa_g07930


Description : not classified & original description: none


Gene families : OG0000459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000459_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07930
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AT1G23220 No alias Dynein light chain type 1 family protein 0.02 OrthoFinder output from all 47 species
Als_g45425 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40803.t1 Aspi01Gene40803 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46981.t1 Aspi01Gene46981 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G037700.1 Ceric.30G037700 not classified & original description: pacid=50607983... 0.04 OrthoFinder output from all 47 species
Dac_g27266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014353001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_19477 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g37490.1 LOC_Os01g37490 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g29928 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017907 No alias light chain of Dynein microtubule-based motor protein... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018319 No alias not classified & original description: CDS=791-1699 0.04 OrthoFinder output from all 47 species
Tin_g34772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007017 microtubule-based process IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001372 Dynein_light_chain_typ-1/2 178 268
No external refs found!