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  5. Spa_g07888

Spa_g07888


Description : not classified & original description: none


Gene families : OG0000509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07888

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00117p00057980 RIN4,... External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
Als_g14198 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33282 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g50234 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.02 OrthoFinder output from all 47 species
Als_g50618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60879.t1 RIN4, Aspi01Gene60879 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene66626.t1 Aspi01Gene66626 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.02G076700.1 RIN4, Ceric.02G076700 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.06 OrthoFinder output from all 47 species
Ceric.25G039200.1 Ceric.25G039200 not classified & original description: pacid=50593178... 0.04 OrthoFinder output from all 47 species
Dcu_g04716 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Ehy_g10233 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g15850 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Lfl_g10632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g26110.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g26518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16131 No alias regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Solyc06g083390.4.1 RIN4, Solyc06g083390 RIN4 effector-triggered immunity RPM1-interacting factor 0.02 OrthoFinder output from all 47 species
Spa_g09623 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Tin_g23904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR008700 TypeIII_avirulence_cleave 198 231
No external refs found!