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  5. Spa_g07830

Spa_g07830


Description : not classified & original description: none


Gene families : OG0001561 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001561_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07830

Target Alias Description ECC score Gene Family Method Actions
Aev_g10885 No alias histone H3K36 methylation reader *(EML) & original... 0.02 OrthoFinder output from all 47 species
Aob_g04338 No alias histone H3K36 methylation reader *(EML) & original... 0.02 OrthoFinder output from all 47 species
Aop_g17440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07311 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g16007 No alias histone H3K36 methylation reader *(EML) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g16668 No alias histone H3K36 methylation reader *(EML) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01001373001 No alias Protein EMSY-LIKE 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01033513001 No alias Protein EMSY-LIKE 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os04g56440.1 LOC_Os04g56440 Protein EMSY-LIKE 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os08g23930.1 LOC_Os08g23930 Protein EMSY-LIKE 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_89637g0010 No alias Protein EMSY-LIKE 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp2g23800.1 No alias Protein EMSY-LIKE 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g02217 No alias histone H3K36 methylation reader *(EML) & original... 0.03 OrthoFinder output from all 47 species
Pir_g00562 No alias histone H3K36 methylation reader *(EML) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g01173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39158 No alias histone H3K36 methylation reader *(EML) & original... 0.02 OrthoFinder output from all 47 species
Smo410248 No alias Protein EMSY-LIKE 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo446942 No alias Protein EMSY-LIKE 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc03g063280.3.1 Solyc03g063280 Protein EMSY-LIKE 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e010070_P003 Zm00001e010070 Protein EMSY-LIKE 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e022216_P004 Zm00001e022216 Protein EMSY-LIKE 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e024387_P004 Zm00001e024387 Protein EMSY-LIKE 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005491 ENT_dom 50 105
No external refs found!