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  5. Spa_g07663

Spa_g07663 (U2A')


Aliases : U2A'

Description : component *(U2A) of U2 snRNP complex & original description: none


Gene families : OG0005171 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005171_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07663
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Aev_g12481 U2A' component *(U2A) of U2 snRNP complex & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21682 U2A' component *(U2A) of U2 snRNP complex & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g10647 U2A' component *(U2A) of U2 snRNP complex & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07390 U2A' component *(U2A) of U2 snRNP complex & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09699 U2A' component *(U2A) of U2 snRNP complex & original description: none 0.04 OrthoFinder output from all 47 species
Cre16.g679600 U2A' RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
Dac_g03610 U2A' component *(U2A) of U2 snRNP complex & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g11620.1 U2A' protein factor U2A of U2 small nuclear ribonucleoprotein... 0.02 OrthoFinder output from all 47 species
Nbi_g13396 U2A' component *(U2A) of U2 snRNP complex & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g06538 No alias component *(U2A) of U2 snRNP complex & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g117940.3.1 U2A', Solyc03g117940 protein factor U2A of U2 small nuclear ribonucleoprotein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!