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  5. Spa_g07629

Spa_g07629


Description : not classified & original description: none


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07629

Target Alias Description ECC score Gene Family Method Actions
Ceric.19G070400.1 Ceric.19G070400 not classified & original description: pacid=50576012... 0.05 OrthoFinder output from all 47 species
GSVIVT01026454001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder output from all 47 species
Gb_10088 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.03 OrthoFinder output from all 47 species
Gb_41247 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.03 OrthoFinder output from all 47 species
LOC_Os01g73480.1 LOC_Os01g73480 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc08g078120.2.1 Solyc08g078120 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e012046_P003 Zm00001e012046 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e042012_P001 Zm00001e042012 component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 810 860
IPR019787 Znf_PHD-finger 887 928
No external refs found!