Spa_g07473

Description : component *(FES1) of FRI-C transcription effector complex & original description: none

Gene families : OG0000859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000859_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g07473
Cluster	HCCA: Cluster_56

Target	Alias	Description	ECC score	Gene Family Method
AT3G26850	No alias	histone-lysine N-methyltransferases	0.03	OrthoFinder output from all 47 species
Aob_g28684	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g08063	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
GSVIVT01010035001	ACCD	RNA biosynthesis.transcriptional activation.C3H zinc...	0.02	OrthoFinder output from all 47 species
Msp_g15688	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Pir_g19528	No alias	component *(FES1) of FRI-C transcription effector...	0.02	OrthoFinder output from all 47 species
Pir_g41479	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Sam_g14643	No alias	component *(FES1) of FRI-C transcription effector...	0.04	OrthoFinder output from all 47 species
Sam_g39875	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Smo439131	No alias	No description available	0.03	OrthoFinder output from all 47 species
Solyc03g006350.3.1	FES1, Solyc03g006350	C3H zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Spa_g17866	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Tin_g13648	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Zm00001e032035_P001	FES1, Zm00001e032035	C3H zinc finger transcription factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0031047	RNA-mediated gene silencing	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000061	Surp	26	77

External Links

No external refs found!

Spa_g07473

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation