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  5. Spa_g07421

Spa_g07421


Description : non-SNARE-type phytolongin & original description: none


Gene families : OG0001363 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001363_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07421

Target Alias Description ECC score Gene Family Method Actions
AT4G27840 No alias SNARE-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aob_g02801 No alias non-SNARE-type phytolongin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47691.t1 Aspi01Gene47691 non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03533 No alias non-SNARE-type phytolongin & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00587 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 68 127
No external refs found!