Spa_g06870


Description : actin cytoskeleton connecting factor *(SINE) & original description: none


Gene families : OG0001812 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001812_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06870
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Ala_g22173 No alias actin cytoskeleton connecting factor *(SINE) & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene52489.t1 Aspi01Gene52489 actin cytoskeleton connecting factor *(SINE) & original... 0.04 OrthoFinder output from all 47 species
Gb_08088 No alias actin cytoskeleton connecting factor (SINE) 0.02 OrthoFinder output from all 47 species
Gb_10260 No alias actin cytoskeleton connecting factor (SINE) 0.03 OrthoFinder output from all 47 species
Pir_g13003 No alias actin cytoskeleton connecting factor *(SINE) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g03203 No alias actin cytoskeleton connecting factor *(SINE) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0176.g024613 No alias actin cytoskeleton connecting factor *(SINE) & original... 0.02 OrthoFinder output from all 47 species
Sam_g42761 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!