Spa_g06555

Description : not classified & original description: none

Gene families : OG0002563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002563_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g06555
Cluster	HCCA: Cluster_173

Target	Alias	Description	ECC score	Gene Family Method
AT4G00380	No alias	XH/XS domain-containing protein	0.03	OrthoFinder output from all 47 species
AT4G01180	No alias	XH/XS domain-containing protein	0.03	OrthoFinder output from all 47 species
Dac_g04691	RDM12, IDN2	regulatory protein of DNA methylation pathway *(IDN/IDP)...	0.04	OrthoFinder output from all 47 species
LOC_Os01g03570.1	RDM12, IDN2,...	IDN/IDP regulatory protein of DNA methylation pathway	0.02	OrthoFinder output from all 47 species
MA_16249g0010	No alias	Factor of DNA methylation 1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_9285293g0010	RDM12, IDN2	IDN/IDP regulatory protein of DNA methylation pathway	0.03	OrthoFinder output from all 47 species
Solyc02g077170.3.1	Solyc02g077170	Factor of DNA methylation 1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031047	RNA-mediated gene silencing	IEA	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005379	FDM1-5/IDN2_XH	424	553
IPR005380	XS_domain	109	228

External Links

No external refs found!