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  5. Spa_g06544

Spa_g06544 (PVA12)


Aliases : PVA12

Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface & original description: none


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06544

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00084420 VAP27, VAP27-1,... Vesicle-associated protein 1-1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g024778 No alias contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Adi_g088258 PVA12 contact site protein (VAP27) of... 0.05 OrthoFinder output from all 47 species
Adi_g102810 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Cba_g21723 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Ceric.39G059000.1 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Cre03.g196900 VAP27, VAP27-1,... Vesicle-associated protein 1-1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g04468 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
GSVIVT01001317001 PVA12 Vesicle-associated protein 1-1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01027683001 PVA12 Vesicle-associated protein 1-2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_28560 No alias contact site protein (VAP27) of... 0.01 OrthoFinder output from all 47 species
LOC_Os08g05890.1 LOC_Os08g05890 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
LOC_Os08g06020.1 PVA12, LOC_Os08g06020 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Mp3g04340.1 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Msp_g03861 PVA12 contact site protein (VAP27) of... 0.08 OrthoFinder output from all 47 species
Msp_g10884 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Tin_g02524 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.07 OrthoFinder output from all 47 species
Zm00001e021734_P002 PVA12, Zm00001e021734 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008531 riboflavin kinase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR000535 MSP_dom 41 144
No external refs found!