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  5. Spa_g06333

Spa_g06333


Description : not classified & original description: none


Gene families : OG0002335 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002335_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06333
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Adi_g053487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056306 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G087000.1 Ceric.20G087000 not classified & original description: pacid=50566894... 0.02 OrthoFinder output from all 47 species
Ceric.25G035600.1 Ceric.25G035600 not classified & original description: pacid=50594367... 0.03 OrthoFinder output from all 47 species
Dac_g15819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g47300.1 LOC_Os06g47300 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g01903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g40452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23008 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 186 247
IPR000504 RRM_dom 21 84
No external refs found!