1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g06214

Spa_g06214


Description : not classified & original description: none


Gene families : OG0004660 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004660_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00137690 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Adi_g053627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22171 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g60006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36989.t1 Aspi01Gene36989 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000545.36 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g04701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000585001 No alias No description available 0.03 OrthoFinder output from all 47 species
MA_29597g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g16584 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo113277 No alias No description available 0.02 OrthoFinder output from all 47 species
Tin_g14028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006853_P001 Zm00001e006853 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007949 SDA1_C 434 801
IPR012977 SDA1_N 77 128
No external refs found!