Spa_g06001


Description : not classified & original description: none


Gene families : OG0000571 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000571_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06001

Target Alias Description ECC score Gene Family Method Actions
Adi_g024393 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20128 No alias phosphatase *(PBCP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0212.g058178 No alias not classified & original description: CDS=137-1573 0.04 OrthoFinder output from all 47 species
Dde_g10343 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g42250.1 LOC_Os02g42250 Putative protein phosphatase 2C 23 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Len_g09215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g09692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g04000.1 No alias Probable protein phosphatase 2C 71 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Ppi_g12898 No alias phosphatase *(PBCP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g064310.2.1 Solyc07g064310 Probable protein phosphatase 2C 55 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e006113_P001 Zm00001e006113 Probable protein phosphatase 2C 55 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e011809_P002 Zm00001e011809 Probable protein phosphatase 2C 55 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 231 439
No external refs found!