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Description : E3 ubiquitin ligase *(RMA/MUSE) & original description: none
Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00264430 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00059p00153580 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g012747 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g101989 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g06676 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g36880 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g51084 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g05095 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07901 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene22843.t1 | Aspi01Gene22843 | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene43434.t1 | Aspi01Gene43434 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0043.g027095 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G009900.1 | Ceric.10G009900 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G044800.1 | RMA3, ATRMA3,... | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.18G044900.1 | Ceric.18G044900 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.18G045000.1 | Ceric.18G045000 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.18G045400.1 | Ceric.18G045400 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G045500.1 | Ceric.18G045500 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000545.1 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g08588 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35812 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g02891 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g18993 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os02g42690.3 | LOC_Os02g42690 | RING-HC-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g44820.1 | RMA3, ATRMA3,... | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Len_g10924 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g46585 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g62388 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g109340.4.1 | Solyc01g109340 | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g010670.1.1 | RMA3, ATRMA3,... | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g03199 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e003329_P001 | Zm00001e003329 | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007434_P001 | RMA3, ATRMA3,... | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041298_P002 | RMA1, ATRMA1,... | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |