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  5. Spa_g05530

Spa_g05530 (ATCAT6, CAT6)


Aliases : ATCAT6, CAT6

Description : cationic amino acid transporter *(CAT) & original description: none


Gene families : OG0000575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000575_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g05530
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00035p00052900 CAT5,... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Aspi01Gene50452.t1 AAT1, CAT1,... cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Dac_g09146 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Dac_g13010 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g05972 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os01g11160.1 CAT5, LOC_Os01g11160 cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
LOC_Os03g43970.1 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
MA_10433254g0020 AAT1, CAT1 cationic amino acid transporter (CAT) 0.05 OrthoFinder output from all 47 species
MA_108090g0010 AAT1, CAT1 cationic amino acid transporter (CAT) 0.04 OrthoFinder output from all 47 species
Msp_g25519 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Solyc02g070280.3.1 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.04 OrthoFinder output from all 47 species
Solyc08g077810.2.1 ATCAT6, CAT6,... Cationic amino acid transporter 6, chloroplastic... 0.04 OrthoFinder output from all 47 species
Tin_g11887 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Tin_g13513 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
InterPro domains Description Start Stop
IPR029485 CAT_C 457 506
IPR002293 AA/rel_permease1 5 415
No external refs found!