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  5. Spa_g05397

Spa_g05397 (SAMDC)


Aliases : SAMDC

Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g05397

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00109640 SAMDC,... Polyamine... 0.02 OrthoFinder output from all 47 species
Als_g04281 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14682 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21795 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.15G068700.1 Ceric.15G068700 EC_4.1 carbon-carbon lyase & original description:... 0.03 OrthoFinder output from all 47 species
Lfl_g25624 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434945g0020 SAMDC S-adenosyl methionine decarboxylase 0.02 OrthoFinder output from all 47 species
Pir_g17324 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18524 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15445 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39268 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g089610.2.1 Solyc02g089610 S-adenosyl methionine decarboxylase 0.02 OrthoFinder output from all 47 species
Solyc03g098310.1.1 Solyc03g098310 ornithine decarboxylase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEA Interproscan
BP GO:0006597 spermine biosynthetic process IEA Interproscan
BP GO:0008295 spermidine biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR022643 De-COase2_C 682 782
IPR022644 De-COase2_N 449 681
IPR001985 S-AdoMet_decarboxylase 19 349
No external refs found!