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  5. Spa_g05239

Spa_g05239 (RAN3, ATRAN3)


Aliases : RAN3, ATRAN3

Description : GTPase *(Ran) & original description: none


Gene families : OG0000916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000916_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g05239
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Ala_g04575 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39040 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene42654.t1 RAN3, ATRAN3,... GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0094.g043417 RAN2 GTPase *(Ran) & original description: CDS=291-938 0.05 OrthoFinder output from all 47 species
Azfi_s0147.g053043 RAN2 GTPase *(Ran) & original description: CDS=1-873 0.14 OrthoFinder output from all 47 species
Azfi_s0548.g076431 RAN2 GTPase *(Ran) & original description: CDS=1-873 0.14 OrthoFinder output from all 47 species
Ceric.10G019400.1 RAN3, ATRAN3,... GTPase *(Ran) & original description: pacid=50612012... 0.08 OrthoFinder output from all 47 species
Ceric.35G063800.1 RAN3, ATRAN3,... GTPase *(Ran) & original description: pacid=50581751... 0.13 OrthoFinder output from all 47 species
Cre03.g191050 RAN1, RAN-1, ATRAN1 Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Dac_g44710 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427158g0010 RAN2 Ran GTPase 0.02 OrthoFinder output from all 47 species
Msp_g02691 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g00842 RAN2 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11147 RAN2 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19307 No alias GTPase *(Ran) & original description: none 0.06 OrthoFinder output from all 47 species
Smo270966 RAN2 Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Solyc01g104680.4.1 RAN2, Solyc01g104680 Ran GTPase 0.03 OrthoFinder output from all 47 species
Solyc05g023800.3.1 RAN2, Solyc05g023800 Ran GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e027977_P001 RAN3, ATRAN3,... Ran GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 8 164
No external refs found!