1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g05208

Spa_g05208


Description : subunit delta of cargo adaptor F-subcomplex & original description: none


Gene families : OG0002181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002181_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g05208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00109690 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
AMTR_s00072p00138870 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
AT5G05010 No alias clathrin adaptor complexes medium subunit family protein 0.07 OrthoFinder output from all 47 species
Adi_g023116 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Adi_g054760 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Adi_g059079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088072 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Adi_g103954 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Aev_g04019 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Ala_g38100 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Als_g27387 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Als_g32029 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72834.t1 Aspi01Gene72834 subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008406 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Cba_g08477 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Ceric.32G009500.1 Ceric.32G009500 subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.20 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder output from all 47 species
Cre02.g089100 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Dac_g03342 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Dcu_g08853 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.08 OrthoFinder output from all 47 species
Dcu_g11196 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01012108001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 OrthoFinder output from all 47 species
Gb_08194 No alias subunit delta of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species
LOC_Os05g24601.1 LOC_Os05g24601 subunit delta of cargo adaptor F-subcomplex 0.06 OrthoFinder output from all 47 species
Len_g21873 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Lfl_g01632 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
MA_20701g0010 No alias subunit delta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
MA_7657529g0010 No alias subunit delta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
Mp3g04840.1 No alias subunit delta of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species
Msp_g01169 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Msp_g12080 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Nbi_g09025 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.11 OrthoFinder output from all 47 species
Ore_g08393 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Pir_g02815 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Ppi_g05201 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014418 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Sam_g18686 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Sam_g18687 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Smo172790 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Solyc01g103480.3.1 Solyc01g103480 subunit delta of cargo adaptor F-subcomplex 0.07 OrthoFinder output from all 47 species
Solyc10g038120.3.1 Solyc10g038120 subunit delta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
Tin_g08212 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.07 OrthoFinder output from all 47 species
Zm00001e018368_P003 Zm00001e018368 subunit delta of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species
Zm00001e039766_P001 Zm00001e039766 subunit delta of cargo adaptor F-subcomplex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 8 134
IPR028565 MHD 275 497
No external refs found!