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  5. Spa_g05104

Spa_g05104 (GAD, GAD1)


Aliases : GAD, GAD1

Description : glutamate decarboxylase *(GAD) & original description: none


Gene families : OG0000690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g05104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00142920 GAD, GAD1,... Amino acid metabolism.biosynthesis.glutamate... 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00144920 GAD5,... Glutamate decarboxylase 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00145270 GAD, GAD1,... Amino acid metabolism.biosynthesis.glutamate... 0.03 OrthoFinder output from all 47 species
AT2G02010 GAD4 glutamate decarboxylase 4 0.06 OrthoFinder output from all 47 species
AT5G17330 GAD, GAD1 glutamate decarboxylase 0.03 OrthoFinder output from all 47 species
Cba_g48925 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32572 GAD, GAD1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g01418 GAD4 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10197 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g39486 GAD4 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011565001 GAD, GAD1 Amino acid metabolism.biosynthesis.glutamate... 0.03 OrthoFinder output from all 47 species
LOC_Os03g13300.1 GAD, GAD1, LOC_Os03g13300 glutamate decarboxylase 0.06 OrthoFinder output from all 47 species
LOC_Os03g51080.1 GAD, GAD1, LOC_Os03g51080 glutamate decarboxylase 0.02 OrthoFinder output from all 47 species
LOC_Os04g37460.1 GAD, GAD1, LOC_Os04g37460 glutamate decarboxylase 0.02 OrthoFinder output from all 47 species
LOC_Os05g34840.1 GAD, GAD1, LOC_Os05g34840 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g20416 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g29680 GAD2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_89828g0010 GAD, GAD1 glutamate decarboxylase 0.03 OrthoFinder output from all 47 species
Nbi_g07461 GAD2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g06503 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g45178 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g098240.3.1 GAD, GAD1, Solyc03g098240 glutamate decarboxylase 0.05 OrthoFinder output from all 47 species
Solyc04g025530.3.1 GAD4, Solyc04g025530 glutamate decarboxylase 0.03 OrthoFinder output from all 47 species
Solyc05g054050.4.1 GAD, GAD1, Solyc05g054050 glutamate decarboxylase 0.03 OrthoFinder output from all 47 species
Spa_g12089 GAD4 glutamate decarboxylase *(GAD) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55008 GAD2 glutamate decarboxylase *(GAD) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016830 carbon-carbon lyase activity IEA Interproscan
BP GO:0019752 carboxylic acid metabolic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 43 385
No external refs found!