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  5. Spa_g04840

Spa_g04840


Description : not classified & original description: none


Gene families : OG0007311 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007311_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04840
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Adi_g060990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081369 ATX3, SDG14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g14697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06422 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20181 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Cba_g01349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.36G054100.1 Ceric.36G054100 not classified & original description: pacid=50568426... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000826.13 ATX3, SDG14 Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g23145 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g30304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17267 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
MA_91236g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g03861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0098.g019460 No alias not classified & original description: CDS=120-4586 0.04 OrthoFinder output from all 47 species
Sam_g25597 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g26552 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019542 Enhancer_polycomb-like_N 628 729
No external refs found!