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  5. Spa_g04828

Spa_g04828


Description : not classified & original description: none


Gene families : OG0007474 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007474_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04828
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00177p00036720 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AT2G03420 No alias unknown protein; Has 38 Blast hits to 38 proteins in 17... 0.1 OrthoFinder output from all 47 species
Als_g07950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06040 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ceric.36G036300.1 Ceric.36G036300 not classified & original description: pacid=50568368... 0.04 OrthoFinder output from all 47 species
Dac_g04431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10784 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01012179001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_38001 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g11230.1 LOC_Os03g11230 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g19133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40026 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_8629045g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Mp6g14320.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008300 No alias not classified & original description: CDS=19-600 0.03 OrthoFinder output from all 47 species
Sam_g25580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g012600.3.1 Solyc05g012600 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Tin_g13961 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e038747_P001 Zm00001e038747 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!