Spa_g04777

Description : light chain of clathrin triskelion & original description: none

Gene families : OG0002188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002188_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g04777

Target	Alias	Description	ECC score	Gene Family Method
Adi_g059492	No alias	light chain of clathrin triskelion & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g077024	No alias	light chain of clathrin triskelion & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g20138	No alias	light chain of clathrin triskelion & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g24594	No alias	light chain of clathrin triskelion & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g37421	No alias	light chain of clathrin triskelion & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g10177	No alias	light chain of clathrin triskelion & original description: none	0.06	OrthoFinder output from all 47 species
Als_g06151	No alias	light chain of clathrin triskelion & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g06413	No alias	light chain of clathrin triskelion & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g00585	No alias	light chain of clathrin triskelion & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.36G039600.1	Ceric.36G039600	light chain of clathrin triskelion & original...	0.05	OrthoFinder output from all 47 species
Dcu_g07971	No alias	light chain of clathrin triskelion & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g03560	No alias	light chain of clathrin triskelion & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os06g51510.1	LOC_Os06g51510	light chain of clathrin triskelion	0.05	OrthoFinder output from all 47 species
LOC_Os07g27750.1	LOC_Os07g27750	light chain of clathrin triskelion	0.02	OrthoFinder output from all 47 species
Len_g17514	No alias	light chain of clathrin triskelion & original description: none	0.04	OrthoFinder output from all 47 species
Len_g23497	No alias	light chain of clathrin triskelion & original description: none	0.03	OrthoFinder output from all 47 species
Len_g30485	No alias	light chain of clathrin triskelion & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g05289	No alias	light chain of clathrin triskelion & original description: none	0.06	OrthoFinder output from all 47 species
Lfl_g05463	No alias	light chain of clathrin triskelion & original description: none	0.02	OrthoFinder output from all 47 species
Mp2g03080.1	No alias	light chain of clathrin triskelion	0.04	OrthoFinder output from all 47 species
Msp_g03939	No alias	light chain of clathrin triskelion & original description: none	0.06	OrthoFinder output from all 47 species
Nbi_g02810	No alias	light chain of clathrin triskelion & original description: none	0.06	OrthoFinder output from all 47 species
Ore_g30776	No alias	light chain of clathrin triskelion & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c11_15000V3.1	Pp3c11_15000	Clathrin light chain protein	0.02	OrthoFinder output from all 47 species
Sam_g29833	No alias	light chain of clathrin triskelion & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g078540.4.1	Solyc02g078540	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Solyc07g054180.4.1	Solyc07g054180	light chain of clathrin triskelion	0.02	OrthoFinder output from all 47 species
Zm00001e006521_P001	Zm00001e006521	light chain of clathrin triskelion	0.02	OrthoFinder output from all 47 species
Zm00001e033442_P001	Zm00001e033442	light chain of clathrin triskelion	0.03	OrthoFinder output from all 47 species
Zm00001e041946_P001	Zm00001e041946	light chain of clathrin triskelion	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030118	clathrin coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030125	clathrin vesicle coat	None	Extended
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEA	Interproscan
CC	GO:0030132	clathrin coat of coated pit	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0004764	shikimate 3-dehydrogenase (NADP+) activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006897	endocytosis	IEP	HCCA
MF	GO:0015098	molybdate ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	HCCA
BP	GO:0015689	molybdate ion transport	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000996	Clathrin_L-chain	178	317

External Links

No external refs found!

Spa_g04777

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation