1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g04430

Spa_g04430


Description : substrate adaptor of CUL3-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0002880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002880_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04430

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00225120 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g41330... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00225570 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At3g09030... 0.03 OrthoFinder output from all 47 species
AT3G09030 No alias BTB/POZ domain-containing protein 0.03 OrthoFinder output from all 47 species
AT5G41330 No alias BTB/POZ domain with WD40/YVTN repeat-like protein 0.03 OrthoFinder output from all 47 species
Aob_g01838 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aop_g01287 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dde_g23416 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Gb_36697 No alias BTB/POZ domain-containing protein At3g09030... 0.03 OrthoFinder output from all 47 species
Mp3g04380.1 No alias BTB/POZ domain-containing protein At3g09030... 0.04 OrthoFinder output from all 47 species
Ore_g09764 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0051260 protein homooligomerization IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR003131 T1-type_BTB 17 101
No external refs found!