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  5. Spa_g04333

Spa_g04333 (CRF3)


Aliases : CRF3

Description : subgroup ERF-VI transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04333
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00021p00185480 ERF-1, ATERF-1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00214620 ESR1, DRN,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00029210 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G53170 ATERF8, ATERF-8, ERF8 ethylene response factor 8 0.03 OrthoFinder output from all 47 species
AT1G78080 RAP2.4 related to AP2 4 0.04 OrthoFinder output from all 47 species
AT2G20880 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G28140 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G19790 RAP2.11 related to AP2 11 0.02 OrthoFinder output from all 47 species
AT5G61590 No alias Integrase-type DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g008629 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Aev_g21810 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Als_g00529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08964 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48728 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Aob_g04116 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aob_g36093 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.05 OrthoFinder output from all 47 species
Aop_g07386 CRF4 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08977 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aspi01Gene32072.t1 Aspi01Gene32072 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene58616.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g26938 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Cba_g69639 Rap2.6L subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G076100.1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G023400.1 Ceric.06G023400 subgroup ERF-I transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.10G018900.1 ERF2, ATERF2,... subgroup ERF-VI transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.29G030500.1 AtERF48, DREB2C,... subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cre14.g620500 ESR1, DRN No description available 0.03 OrthoFinder output from all 47 species
Dac_g23065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14596 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g45420.1 LOC_Os02g45420 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os07g42510.1 RAP2.12, LOC_Os07g42510 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Lfl_g06043 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40989 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_103035g0010 No alias transcription factor (ERF) 0.06 OrthoFinder output from all 47 species
MA_10430231g0010 WIN1, SHN1 transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
MA_115348g0020 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_166248g0020 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_19420g0010 No alias transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
MA_83118g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Mp5g22160.1 ERF110 Ethylene-responsive transcription factor ERF112... 0.02 OrthoFinder output from all 47 species
Mp7g17020.1 No alias Dehydration-responsive element-binding protein 2C... 0.02 OrthoFinder output from all 47 species
Nbi_g09224 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g18180 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g28444 ATERF12, ERF12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37613 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008166 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013375 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022062 No alias subgroup ERF-VI transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0200.g025602 No alias subgroup ERF-V transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g29719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g091760.3.1 RAP2.11, Solyc01g091760 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Solyc03g093610.1.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc05g051180.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc05g052030.1.1 Solyc05g052030 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc08g007840.3.1 Solyc08g007840 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Spa_g01688 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g26845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39178 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39600 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03837 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g04619 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07037 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000689_P001 Zm00001e000689 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e001139_P001 DREB26, Zm00001e001139 Ethylene-responsive transcription factor ERF014... 0.02 OrthoFinder output from all 47 species
Zm00001e007206_P001 Zm00001e007206 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e022864_P001 ESR1, DRN, Zm00001e022864 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e032032_P001 ATERF12, ERF12,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e033072_P001 RAP2.11, Zm00001e033072 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Zm00001e033790_P001 Zm00001e033790 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 159 209
No external refs found!